Index

Symbols

--alpha <alpha> seffnet-repeat command line option seffnet-train command line option --beta <beta> seffnet-repeat command line option seffnet-train command line option --chemicals-list <chemicals_list> seffnet-update command line option --chemsim-graph-path <chemsim_graph_path> seffnet-update command line option --classifier-type <classifier_type> seffnet-optimize command line option seffnet-repeat command line option seffnet-train command line option --dimensions <dimensions> seffnet-repeat command line option seffnet-train command line option --dimensions-range <dimensions_range> seffnet-optimize command line option --embeddings-path <embeddings_path> seffnet-train command line option seffnet-update command line option --epochs <epochs> seffnet-repeat command line option seffnet-train command line option --evaluation seffnet-train command line option --evaluation-file <evaluation_file> seffnet-repeat command line option seffnet-train command line option --host <host> seffnet-web command line option --input-path <input_path> seffnet-optimize command line option seffnet-repeat command line option seffnet-train command line option --kstep <kstep> seffnet-repeat command line option seffnet-train command line option --labels-file <labels_file> seffnet-optimize command line option seffnet-train command line option --method <method> seffnet-optimize command line option seffnet-repeat command line option seffnet-train command line option --n <n> seffnet-repeat command line option --name <name> seffnet-optimize command line option --new-training-model-path <new_training_model_path> seffnet-update command line option --number-predictions <number_predictions> seffnet-predict command line option seffnet-predictc command line option --number-walks <number_walks> seffnet-repeat command line option seffnet-train command line option --old-graph <old_graph> seffnet-update command line option --order <order> seffnet-repeat command line option seffnet-train command line option

--output <output> seffnet-optimize command line option --p <p> seffnet-repeat command line option seffnet-train command line option --port <port> seffnet-web command line option --prediction-task <prediction_task> seffnet-optimize command line option seffnet-repeat command line option seffnet-train command line option --predictive-model-path <predictive_model_path> seffnet-train command line option seffnet-update command line option --q <q> seffnet-repeat command line option seffnet-train command line option --randomization <randomization> seffnet-repeat command line option --result-type <result_type> seffnet-predict command line option seffnet-predictc command line option --seed <seed> seffnet-optimize command line option seffnet-repeat command line option seffnet-train command line option seffnet-update command line option --storage <storage> seffnet-optimize command line option --testing-path <testing_path> seffnet-optimize command line option seffnet-repeat command line option seffnet-train command line option --training-model-path <training_model_path> seffnet-train command line option seffnet-update command line option --training-path <training_path> seffnet-optimize command line option seffnet-repeat command line option seffnet-train command line option --trials <trials> seffnet-optimize command line option --updated-graph <updated_graph> seffnet-update command line option --updated-graph-path <updated_graph_path> seffnet-update command line option --walk-length <walk_length> seffnet-repeat command line option seffnet-train command line option --weighted seffnet-optimize command line option seffnet-repeat command line option seffnet-train command line option --window-size <window_size> seffnet-repeat command line option seffnet-train command line option -n seffnet-predict command line option seffnet-predictc command line option -o seffnet-optimize command line option -t seffnet-predict command line option seffnet-predictc command line option

C

CURIE seffnet-predict command line option

S

seffnet (module) seffnet-optimize command line option --classifier-type <classifier_type> --dimensions-range <dimensions_range> --input-path <input_path> --labels-file <labels_file> --method <method> --name <name> --output <output> --prediction-task <prediction_task> --seed <seed> --storage <storage> --testing-path <testing_path> --training-path <training_path> --trials <trials> --weighted -o seffnet-predict command line option --number-predictions <number_predictions> --result-type <result_type> -n -t CURIE seffnet-predictc command line option --number-predictions <number_predictions> --result-type <result_type> -n -t SMILES seffnet-repeat command line option --alpha <alpha> --beta <beta> --classifier-type <classifier_type> --dimensions <dimensions> --epochs <epochs> --evaluation-file <evaluation_file> --input-path <input_path> --kstep <kstep> --method <method> --n <n> --number-walks <number_walks> --order <order> --p <p> --prediction-task <prediction_task> --q <q> --randomization <randomization> --seed <seed> --testing-path <testing_path> --training-path <training_path> --walk-length <walk_length> --weighted --window-size <window_size>

seffnet-train command line option --alpha <alpha> --beta <beta> --classifier-type <classifier_type> --dimensions <dimensions> --embeddings-path <embeddings_path> --epochs <epochs> --evaluation --evaluation-file <evaluation_file> --input-path <input_path> --kstep <kstep> --labels-file <labels_file> --method <method> --number-walks <number_walks> --order <order> --p <p> --prediction-task <prediction_task> --predictive-model-path <predictive_model_path> --q <q> --seed <seed> --testing-path <testing_path> --training-model-path <training_model_path> --training-path <training_path> --walk-length <walk_length> --weighted --window-size <window_size> seffnet-update command line option --chemicals-list <chemicals_list> --chemsim-graph-path <chemsim_graph_path> --embeddings-path <embeddings_path> --new-training-model-path <new_training_model_path> --old-graph <old_graph> --predictive-model-path <predictive_model_path> --seed <seed> --training-model-path <training_model_path> --updated-graph <updated_graph> --updated-graph-path <updated_graph_path> seffnet-web command line option --host <host> --port <port> SMILES seffnet-predictc command line option